Coverage for python / lsst / pipe / base / quantum_graph_skeleton.py: 34%

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1# This file is part of pipe_base. 

2# 

3# Developed for the LSST Data Management System. 

4# This product includes software developed by the LSST Project 

5# (http://www.lsst.org). 

6# See the COPYRIGHT file at the top-level directory of this distribution 

7# for details of code ownership. 

8# 

9# This software is dual licensed under the GNU General Public License and also 

10# under a 3-clause BSD license. Recipients may choose which of these licenses 

11# to use; please see the files gpl-3.0.txt and/or bsd_license.txt, 

12# respectively. If you choose the GPL option then the following text applies 

13# (but note that there is still no warranty even if you opt for BSD instead): 

14# 

15# This program is free software: you can redistribute it and/or modify 

16# it under the terms of the GNU General Public License as published by 

17# the Free Software Foundation, either version 3 of the License, or 

18# (at your option) any later version. 

19# 

20# This program is distributed in the hope that it will be useful, 

21# but WITHOUT ANY WARRANTY; without even the implied warranty of 

22# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the 

23# GNU General Public License for more details. 

24# 

25# You should have received a copy of the GNU General Public License 

26# along with this program. If not, see <http://www.gnu.org/licenses/>. 

27 

28"""An under-construction version of QuantumGraph and various helper 

29classes. 

30""" 

31 

32from __future__ import annotations 

33 

34__all__ = ( 

35 "DatasetKey", 

36 "PrerequisiteDatasetKey", 

37 "QuantumGraphSkeleton", 

38 "QuantumKey", 

39 "TaskInitKey", 

40) 

41 

42import dataclasses 

43from collections import defaultdict 

44from collections.abc import Iterable, Iterator, MutableMapping, Set 

45from typing import TYPE_CHECKING, Any, ClassVar, Literal, TypeAlias 

46 

47import networkx 

48 

49from lsst.daf.butler import ( 

50 Butler, 

51 DataCoordinate, 

52 DataIdValue, 

53 DatasetRef, 

54 DimensionDataAttacher, 

55 DimensionDataExtractor, 

56 DimensionGroup, 

57 DimensionRecordSet, 

58) 

59from lsst.utils.logging import getLogger 

60 

61if TYPE_CHECKING: 

62 pass 

63 

64_LOG = getLogger(__name__) 

65 

66 

67@dataclasses.dataclass(slots=True, eq=True, frozen=True) 

68class QuantumKey: 

69 """Identifier type for quantum keys in a `QuantumGraphSkeleton`.""" 

70 

71 task_label: str 

72 """Label of the task in the pipeline.""" 

73 

74 data_id_values: tuple[DataIdValue, ...] 

75 """Data ID values of the quantum. 

76 

77 Note that keys are fixed given `task_label`, so using only the values here 

78 speeds up comparisons. 

79 """ 

80 

81 is_task: ClassVar[Literal[True]] = True 

82 """Whether this node represents a quantum or task initialization rather 

83 than a dataset (always `True`). 

84 """ 

85 

86 

87@dataclasses.dataclass(slots=True, eq=True, frozen=True) 

88class TaskInitKey: 

89 """Identifier type for task init keys in a `QuantumGraphSkeleton`.""" 

90 

91 task_label: str 

92 """Label of the task in the pipeline.""" 

93 

94 is_task: ClassVar[Literal[True]] = True 

95 """Whether this node represents a quantum or task initialization rather 

96 than a dataset (always `True`). 

97 """ 

98 

99 

100@dataclasses.dataclass(slots=True, eq=True, frozen=True) 

101class DatasetKey: 

102 """Identifier type for dataset keys in a `QuantumGraphSkeleton`.""" 

103 

104 parent_dataset_type_name: str 

105 """Name of the dataset type (never a component).""" 

106 

107 data_id_values: tuple[DataIdValue, ...] 

108 """Data ID values of the dataset. 

109 

110 Note that keys are fixed given `parent_dataset_type_name`, so using only 

111 the values here speeds up comparisons. 

112 """ 

113 

114 is_task: ClassVar[Literal[False]] = False 

115 """Whether this node represents a quantum or task initialization rather 

116 than a dataset (always `False`). 

117 """ 

118 

119 is_prerequisite: ClassVar[Literal[False]] = False 

120 

121 

122@dataclasses.dataclass(slots=True, eq=True, frozen=True) 

123class PrerequisiteDatasetKey: 

124 """Identifier type for prerequisite dataset keys in a 

125 `QuantumGraphSkeleton`. 

126 

127 Unlike regular datasets, prerequisites are not actually required to come 

128 from a find-first search of `input_collections`, so we don't want to 

129 assume that the same data ID implies the same dataset. Happily we also 

130 don't need to search for them by data ID in the graph, so we can use the 

131 dataset ID (UUID) instead. 

132 """ 

133 

134 parent_dataset_type_name: str 

135 """Name of the dataset type (never a component).""" 

136 

137 dataset_id_bytes: bytes 

138 """Dataset ID (UUID) as raw bytes.""" 

139 

140 is_task: ClassVar[Literal[False]] = False 

141 """Whether this node represents a quantum or task initialization rather 

142 than a dataset (always `False`). 

143 """ 

144 

145 is_prerequisite: ClassVar[Literal[True]] = True 

146 

147 

148Key: TypeAlias = QuantumKey | TaskInitKey | DatasetKey | PrerequisiteDatasetKey 

149 

150 

151class QuantumGraphSkeleton: 

152 """An under-construction quantum graph. 

153 

154 QuantumGraphSkeleton is intended for use inside `QuantumGraphBuilder` and 

155 its subclasses. 

156 

157 Parameters 

158 ---------- 

159 task_labels : `~collections.abc.Iterable` [ `str` ] 

160 The labels of all tasks whose quanta may be included in the graph, in 

161 topological order. 

162 

163 Notes 

164 ----- 

165 QuantumGraphSkeleton models a bipartite version of the quantum graph, in 

166 which both quanta and datasets are represented as nodes and each type of 

167 node only has edges to the other type. 

168 

169 Square-bracket (`getitem`) indexing returns a mutable mapping of a node's 

170 flexible attributes. 

171 

172 The details of the `QuantumGraphSkeleton` API (e.g. which operations 

173 operate on multiple nodes vs. a single node) are set by what's actually 

174 needed by current quantum graph generation algorithms. New variants can be 

175 added as needed, but adding all operations that *might* be useful for some 

176 future algorithm seems premature. 

177 """ 

178 

179 def __init__(self, task_labels: Iterable[str]): 

180 self._tasks: dict[str, tuple[TaskInitKey, set[QuantumKey]]] = {} 

181 self._xgraph: networkx.DiGraph = networkx.DiGraph() 

182 self._global_init_outputs: set[DatasetKey] = set() 

183 self._dimension_data: dict[str, DimensionRecordSet] = {} 

184 for task_label in task_labels: 

185 task_init_key = TaskInitKey(task_label) 

186 self._tasks[task_label] = (task_init_key, set()) 

187 self._xgraph.add_node(task_init_key) 

188 

189 def __contains__(self, key: Key) -> bool: 

190 return key in self._xgraph.nodes 

191 

192 def __getitem__(self, key: Key) -> MutableMapping[str, Any]: 

193 return self._xgraph.nodes[key] 

194 

195 def __iter__(self) -> Iterator[Key]: 

196 return iter(self._xgraph.nodes) 

197 

198 @property 

199 def n_nodes(self) -> int: 

200 """The total number of nodes of all types.""" 

201 return len(self._xgraph.nodes) 

202 

203 @property 

204 def n_edges(self) -> int: 

205 """The total number of edges.""" 

206 return len(self._xgraph.edges) 

207 

208 @property 

209 def has_any_quanta(self) -> bool: 

210 """Test whether this graph has any quanta.""" 

211 for _ in self.iter_all_quanta(): 

212 return True 

213 return False 

214 

215 def has_task(self, task_label: str) -> bool: 

216 """Test whether the given task is in this skeleton. 

217 

218 Tasks are only added to the skeleton at initialization, but may be 

219 removed by `remove_task` if they end up having no quanta. 

220 

221 Parameters 

222 ---------- 

223 task_label : `str` 

224 Task to check for. 

225 

226 Returns 

227 ------- 

228 has : `bool` 

229 `True` if the task is in this skeleton. 

230 """ 

231 return task_label in self._tasks 

232 

233 def get_task_init_node(self, task_label: str) -> TaskInitKey: 

234 """Return the graph node that represents a task's initialization. 

235 

236 Parameters 

237 ---------- 

238 task_label : `str` 

239 The task label to use. 

240 

241 Returns 

242 ------- 

243 node : `TaskInitKey` 

244 The graph node representing this task's initialization. 

245 """ 

246 return self._tasks[task_label][0] 

247 

248 def get_quanta(self, task_label: str) -> Set[QuantumKey]: 

249 """Return the quanta for the given task label. 

250 

251 Parameters 

252 ---------- 

253 task_label : `str` 

254 Label for the task. 

255 

256 Returns 

257 ------- 

258 quanta : `~collections.abc.Set` [ `QuantumKey` ] 

259 A set-like object with the identifiers of all quanta for the given 

260 task. *The skeleton object's set of quanta must not be modified 

261 while iterating over this container; make a copy if mutation during 

262 iteration is necessary*. 

263 """ 

264 return self._tasks[task_label][1] 

265 

266 @property 

267 def global_init_outputs(self) -> Set[DatasetKey]: 

268 """The set of dataset nodes that are not associated with any task.""" 

269 return self._global_init_outputs 

270 

271 def iter_all_quanta(self) -> Iterator[QuantumKey]: 

272 """Iterate over all quanta from any task, in topological (but otherwise 

273 unspecified) order. 

274 """ 

275 for _, quanta in self._tasks.values(): 

276 yield from quanta 

277 

278 def iter_outputs_of(self, quantum_key: QuantumKey | TaskInitKey) -> Iterator[DatasetKey]: 

279 """Iterate over the datasets produced by the given quantum. 

280 

281 Parameters 

282 ---------- 

283 quantum_key : `QuantumKey` or `TaskInitKey` 

284 Quantum to iterate over. 

285 

286 Returns 

287 ------- 

288 datasets : `~collections.abc.Iterator` of `DatasetKey` 

289 Datasets produced by the given quanta. 

290 """ 

291 return self._xgraph.successors(quantum_key) 

292 

293 def iter_inputs_of( 

294 self, quantum_key: QuantumKey | TaskInitKey 

295 ) -> Iterator[DatasetKey | PrerequisiteDatasetKey]: 

296 """Iterate over the datasets consumed by the given quantum. 

297 

298 Parameters 

299 ---------- 

300 quantum_key : `QuantumKey` or `TaskInitKey` 

301 Quantum to iterate over. 

302 

303 Returns 

304 ------- 

305 datasets : `~collections.abc.Iterator` of `DatasetKey` \ 

306 or `PrequisiteDatasetKey` 

307 Datasets consumed by the given quanta. 

308 """ 

309 return self._xgraph.predecessors(quantum_key) 

310 

311 def update(self, other: QuantumGraphSkeleton) -> None: 

312 """Copy all nodes from ``other`` to ``self``. 

313 

314 Parameters 

315 ---------- 

316 other : `QuantumGraphSkeleton` 

317 Source of nodes. The tasks in ``other`` must be a subset of the 

318 tasks in ``self`` (this method is expected to be used to populate 

319 a skeleton for a full from independent-subgraph skeletons). 

320 """ 

321 for task_label, (_, quanta) in other._tasks.items(): 

322 self._tasks[task_label][1].update(quanta) 

323 self._xgraph.update(other._xgraph) 

324 for record_set in other._dimension_data.values(): 

325 self._dimension_data.setdefault( 

326 record_set.element.name, DimensionRecordSet(record_set.element) 

327 ).update(record_set) 

328 

329 def add_quantum_node(self, task_label: str, data_id: DataCoordinate, **attrs: Any) -> QuantumKey: 

330 """Add a new node representing a quantum. 

331 

332 Parameters 

333 ---------- 

334 task_label : `str` 

335 Name of task. 

336 data_id : `~lsst.daf.butler.DataCoordinate` 

337 The data ID of the quantum. 

338 **attrs : `~typing.Any` 

339 Additional attributes. 

340 """ 

341 key = QuantumKey(task_label, data_id.required_values) 

342 self._xgraph.add_node(key, data_id=data_id, **attrs) 

343 self._tasks[key.task_label][1].add(key) 

344 return key 

345 

346 def add_dataset_node( 

347 self, 

348 parent_dataset_type_name: str, 

349 data_id: DataCoordinate, 

350 is_global_init_output: bool = False, 

351 **attrs: Any, 

352 ) -> DatasetKey: 

353 """Add a new node representing a dataset. 

354 

355 Parameters 

356 ---------- 

357 parent_dataset_type_name : `str` 

358 Name of the parent dataset type. 

359 data_id : `~lsst.daf.butler.DataCoordinate` 

360 The dataset data ID. 

361 is_global_init_output : `bool`, optional 

362 Whether this dataset is a global init output. 

363 **attrs : `~typing.Any` 

364 Additional attributes for the node. 

365 """ 

366 key = DatasetKey(parent_dataset_type_name, data_id.required_values) 

367 self._xgraph.add_node(key, data_id=data_id, **attrs) 

368 if is_global_init_output: 

369 assert isinstance(key, DatasetKey), str(key) 

370 self._global_init_outputs.add(key) 

371 return key 

372 

373 def add_prerequisite_node( 

374 self, 

375 ref: DatasetRef, 

376 **attrs: Any, 

377 ) -> PrerequisiteDatasetKey: 

378 """Add a new node representing a prerequisite input dataset. 

379 

380 Parameters 

381 ---------- 

382 ref : `~lsst.daf.butler.DatasetRef` 

383 The dataset ref of the prerequisite. 

384 **attrs : `~typing.Any` 

385 Additional attributes for the node. 

386 """ 

387 key = PrerequisiteDatasetKey(ref.datasetType.name, ref.id.bytes) 

388 self._xgraph.add_node(key, data_id=ref.dataId, ref=ref, **attrs) 

389 return key 

390 

391 def remove_quantum_node(self, key: QuantumKey, remove_outputs: bool) -> None: 

392 """Remove a node representing a quantum. 

393 

394 Parameters 

395 ---------- 

396 key : `QuantumKey` 

397 Identifier for the node. 

398 remove_outputs : `bool` 

399 If `True`, also remove all dataset nodes produced by this quantum. 

400 If `False`, any such dataset nodes will become overall inputs. 

401 """ 

402 _, quanta = self._tasks[key.task_label] 

403 quanta.remove(key) 

404 if remove_outputs: 

405 to_remove = list(self._xgraph.successors(key)) 

406 to_remove.append(key) 

407 self._xgraph.remove_nodes_from(to_remove) 

408 else: 

409 self._xgraph.remove_node(key) 

410 

411 def remove_dataset_nodes(self, keys: Iterable[DatasetKey | PrerequisiteDatasetKey]) -> None: 

412 """Remove nodes representing datasets. 

413 

414 Parameters 

415 ---------- 

416 keys : `~collections.abc.Iterable` of `DatasetKey`\ 

417 or `PrerequisiteDatasetKey` 

418 Nodes to remove. 

419 """ 

420 self._xgraph.remove_nodes_from(keys) 

421 

422 def remove_task(self, task_label: str) -> None: 

423 """Fully remove a task from the skeleton. 

424 

425 All init-output datasets and quanta for the task must already have been 

426 removed. 

427 

428 Parameters 

429 ---------- 

430 task_label : `str` 

431 Name of task to remove. 

432 """ 

433 task_init_key, quanta = self._tasks.pop(task_label) 

434 assert not quanta, "Cannot remove task unless all quanta have already been removed." 

435 assert not list(self._xgraph.successors(task_init_key)) 

436 self._xgraph.remove_node(task_init_key) 

437 

438 def add_input_edges( 

439 self, 

440 task_key: QuantumKey | TaskInitKey, 

441 dataset_keys: Iterable[DatasetKey | PrerequisiteDatasetKey], 

442 ) -> None: 

443 """Add edges connecting datasets to a quantum that consumes them. 

444 

445 Parameters 

446 ---------- 

447 task_key : `QuantumKey` or `TaskInitKey` 

448 Quantum to connect. 

449 dataset_keys : `~collections.abc.Iterable` of `DatasetKey`\ 

450 or `PrequisiteDatasetKey` 

451 Datasets to join to the quantum. 

452 

453 Notes 

454 ----- 

455 This must only be called if the task node has already been added. 

456 Use `add_input_edge` if this cannot be assumed. 

457 

458 Dataset nodes that are not already present will be created. 

459 """ 

460 assert task_key in self._xgraph, str(task_key) 

461 self._xgraph.add_edges_from((dataset_key, task_key) for dataset_key in dataset_keys) 

462 

463 def remove_input_edges( 

464 self, 

465 task_key: QuantumKey | TaskInitKey, 

466 dataset_keys: Iterable[DatasetKey | PrerequisiteDatasetKey], 

467 ) -> None: 

468 """Remove edges connecting datasets to a quantum that consumes them. 

469 

470 Parameters 

471 ---------- 

472 task_key : `QuantumKey` or `TaskInitKey` 

473 Quantum to disconnect. 

474 dataset_keys : `~collections.abc.Iterable` of `DatasetKey`\ 

475 or `PrequisiteDatasetKey` 

476 Datasets to remove from the quantum. 

477 """ 

478 self._xgraph.remove_edges_from((dataset_key, task_key) for dataset_key in dataset_keys) 

479 

480 def add_input_edge( 

481 self, 

482 task_key: QuantumKey | TaskInitKey, 

483 dataset_key: DatasetKey | PrerequisiteDatasetKey, 

484 ignore_unrecognized_quanta: bool = False, 

485 ) -> bool: 

486 """Add an edge connecting a dataset to a quantum that consumes it. 

487 

488 Parameters 

489 ---------- 

490 task_key : `QuantumKey` or `TaskInitKey` 

491 Identifier for the quantum node. 

492 dataset_key : `DatasetKey` or `PrerequisiteKey` 

493 Identifier for the dataset node. 

494 ignore_unrecognized_quanta : `bool`, optional 

495 If `False`, do nothing if the quantum node is not already present. 

496 If `True`, the quantum node is assumed to be present. 

497 

498 Returns 

499 ------- 

500 added : `bool` 

501 `True` if an edge was actually added, `False` if the quantum was 

502 not recognized and the edge was not added as a result. 

503 

504 Notes 

505 ----- 

506 Dataset nodes that are not already present will be created. 

507 """ 

508 if ignore_unrecognized_quanta and task_key not in self._xgraph: 

509 return False 

510 self._xgraph.add_edge(dataset_key, task_key) 

511 return True 

512 

513 def add_output_edge(self, task_key: QuantumKey | TaskInitKey, dataset_key: DatasetKey) -> None: 

514 """Add an edge connecting a dataset to the quantum that produces it. 

515 

516 Parameters 

517 ---------- 

518 task_key : `QuantumKey` or `TaskInitKey` 

519 Identifier for the quantum node. Must identify a node already 

520 present in the graph. 

521 dataset_key : `DatasetKey` 

522 Identifier for the dataset node. Must identify a node already 

523 present in the graph. 

524 """ 

525 assert task_key in self._xgraph, str(task_key) 

526 assert dataset_key in self._xgraph, str(dataset_key) 

527 self._xgraph.add_edge(task_key, dataset_key) 

528 

529 def remove_output_edge(self, dataset_key: DatasetKey) -> None: 

530 """Remove the edge connecting a dataset to the quantum that produces 

531 it. 

532 

533 Parameters 

534 ---------- 

535 dataset_key : `DatasetKey` 

536 Identifier for the dataset node. Must identify a node already 

537 present in the graph. 

538 """ 

539 (task_key,) = self._xgraph.predecessors(dataset_key) 

540 assert dataset_key in self._xgraph, str(dataset_key) 

541 self._xgraph.remove_edge(task_key, dataset_key) 

542 

543 def remove_orphan_datasets(self) -> None: 

544 """Remove any dataset nodes that do not have any edges.""" 

545 for orphan in list(networkx.isolates(self._xgraph)): 

546 if not orphan.is_task and orphan not in self._global_init_outputs: 

547 self._xgraph.remove_node(orphan) 

548 

549 def extract_overall_inputs(self) -> dict[DatasetKey | PrerequisiteDatasetKey, DatasetRef]: 

550 """Find overall input datasets. 

551 

552 Returns 

553 ------- 

554 datasets : `dict` [ `DatasetKey` or `PrerequisiteDatasetKey`, \ 

555 `~lsst.daf.butler.DatasetRef` ] 

556 Overall-input datasets, including prerequisites and init-inputs. 

557 """ 

558 result = {} 

559 for generation in networkx.algorithms.topological_generations(self._xgraph): 

560 for dataset_key in generation: 

561 if dataset_key.is_task: 

562 continue 

563 if (ref := self.get_dataset_ref(dataset_key)) is None: 

564 raise AssertionError( 

565 f"Logic bug in QG generation: dataset {dataset_key} was never resolved." 

566 ) 

567 result[dataset_key] = ref 

568 break 

569 return result 

570 

571 def set_dataset_ref( 

572 self, ref: DatasetRef, key: DatasetKey | PrerequisiteDatasetKey | None = None 

573 ) -> None: 

574 """Associate a dataset node with a `DatasetRef` instance. 

575 

576 Parameters 

577 ---------- 

578 ref : `DatasetRef` 

579 `DatasetRef` to associate with the node. 

580 key : `DatasetKey` or `PrerequisiteDatasetKey`, optional 

581 Identifier for the graph node. If not provided, a `DatasetKey` 

582 is constructed from the dataset type name and data ID of ``ref``. 

583 """ 

584 if key is None: 

585 key = DatasetKey(ref.datasetType.name, ref.dataId.required_values) 

586 self._xgraph.nodes[key]["ref"] = ref 

587 

588 def set_output_for_skip(self, ref: DatasetRef) -> None: 

589 """Associate a dataset node with a `DatasetRef` that represents an 

590 existing output in a collection where such outputs can cause a quantum 

591 to be skipped. 

592 

593 Parameters 

594 ---------- 

595 ref : `DatasetRef` 

596 `DatasetRef` to associate with the node. 

597 """ 

598 key = DatasetKey(ref.datasetType.name, ref.dataId.required_values) 

599 self._xgraph.nodes[key]["output_for_skip"] = ref 

600 

601 def set_output_in_the_way(self, ref: DatasetRef) -> None: 

602 """Associate a dataset node with a `DatasetRef` that represents an 

603 existing output in the output RUN collection. 

604 

605 Parameters 

606 ---------- 

607 ref : `DatasetRef` 

608 `DatasetRef` to associate with the node. 

609 """ 

610 key = DatasetKey(ref.datasetType.name, ref.dataId.required_values) 

611 self._xgraph.nodes[key]["output_in_the_way"] = ref 

612 

613 def get_dataset_ref(self, key: DatasetKey | PrerequisiteDatasetKey) -> DatasetRef | None: 

614 """Return the `DatasetRef` associated with the given node. 

615 

616 This does not return "output for skip" and "output in the way" 

617 datasets. 

618 

619 Parameters 

620 ---------- 

621 key : `DatasetKey` or `PrerequisiteDatasetKey` 

622 Identifier for the graph node. 

623 

624 Returns 

625 ------- 

626 ref : `DatasetRef` or `None` 

627 Dataset reference associated with the node. 

628 """ 

629 return self._xgraph.nodes[key].get("ref") 

630 

631 def get_output_for_skip(self, key: DatasetKey) -> DatasetRef | None: 

632 """Return the `DatasetRef` associated with the given node in a 

633 collection where it could lead to a quantum being skipped. 

634 

635 Parameters 

636 ---------- 

637 key : `DatasetKey` 

638 Identifier for the graph node. 

639 

640 Returns 

641 ------- 

642 ref : `DatasetRef` or `None` 

643 Dataset reference associated with the node. 

644 """ 

645 return self._xgraph.nodes[key].get("output_for_skip") 

646 

647 def get_output_in_the_way(self, key: DatasetKey) -> DatasetRef | None: 

648 """Return the `DatasetRef` associated with the given node in the 

649 output RUN collection. 

650 

651 Parameters 

652 ---------- 

653 key : `DatasetKey` 

654 Identifier for the graph node. 

655 

656 Returns 

657 ------- 

658 ref : `DatasetRef` or `None` 

659 Dataset reference associated with the node. 

660 """ 

661 return self._xgraph.nodes[key].get("output_in_the_way") 

662 

663 def discard_output_in_the_way(self, key: DatasetKey) -> None: 

664 """Drop any `DatasetRef` associated with this node in the output RUN 

665 collection. 

666 

667 Does nothing if there is no such `DatasetRef`. 

668 

669 Parameters 

670 ---------- 

671 key : `DatasetKey` 

672 Identifier for the graph node. 

673 """ 

674 self._xgraph.nodes[key].pop("output_in_the_way", None) 

675 

676 def set_data_id(self, key: Key, data_id: DataCoordinate) -> None: 

677 """Set the data ID associated with a node. 

678 

679 This updates the data ID in any `DatasetRef` objects associated with 

680 the node via `set_ref`, `set_output_for_skip`, or 

681 `set_output_in_the_way` as well, assuming it is an expanded version 

682 of the original data ID. 

683 

684 Parameters 

685 ---------- 

686 key : `Key` 

687 Identifier for the graph node. 

688 data_id : `DataCoordinate` 

689 Data ID for the node. 

690 """ 

691 state: MutableMapping[str, Any] = self._xgraph.nodes[key] 

692 state["data_id"] = data_id 

693 ref: DatasetRef | None 

694 if (ref := state.get("ref")) is not None: 

695 state["ref"] = ref.expanded(data_id) 

696 output_for_skip: DatasetRef | None 

697 if (output_for_skip := state.get("output_for_skip")) is not None: 

698 state["output_for_skip"] = output_for_skip.expanded(data_id) 

699 output_in_the_way: DatasetRef | None 

700 if (output_in_the_way := state.get("output_in_the_way")) is not None: 

701 state["output_in_the_way"] = output_in_the_way.expanded(data_id) 

702 

703 def get_data_id(self, key: Key) -> DataCoordinate: 

704 """Return the full data ID for a quantum or dataset, if available. 

705 

706 Parameters 

707 ---------- 

708 key : `Key` 

709 Identifier for the graph node. 

710 

711 Returns 

712 ------- 

713 data_id : `DataCoordinate` 

714 Expanded data ID for the node, if one is available. 

715 

716 Raises 

717 ------ 

718 KeyError 

719 Raised if this node does not have an expanded data ID. 

720 """ 

721 return self._xgraph.nodes[key]["data_id"] 

722 

723 def attach_dimension_records( 

724 self, 

725 butler: Butler, 

726 dimensions: DimensionGroup, 

727 dimension_records: Iterable[DimensionRecordSet] = (), 

728 ) -> None: 

729 """Attach dimension records to the data IDs in the skeleton. 

730 

731 This both attaches records to data IDs in the skeleton and aggregates 

732 any existing records on data IDS, so `get_dimension_data` returns all 

733 dimension records used in the skeleton. It can be called multiple 

734 times. 

735 

736 Parameters 

737 ---------- 

738 butler : `lsst.daf.butler.Butler` 

739 Butler to use to query for missing dimension records. 

740 dimensions : `lsst.daf.butler.DimensionGroup` 

741 Superset of all of the dimensions of all data IDs. 

742 dimension_records : `~collections.abc.Iterable` [ \ 

743 `lsst.daf.butler.DimensionRecordSet` ], optional 

744 Iterable of sets of dimension records to attach. 

745 """ 

746 for record_set in dimension_records: 

747 self._dimension_data.setdefault( 

748 record_set.element.name, DimensionRecordSet(record_set.element) 

749 ).update(record_set) 

750 # Group all nodes by data ID (and dimensions of data ID). 

751 data_ids_to_expand: defaultdict[DimensionGroup, defaultdict[DataCoordinate, list[Key]]] = defaultdict( 

752 lambda: defaultdict(list) 

753 ) 

754 extractor = DimensionDataExtractor.from_dimension_group(dimensions) 

755 data_id: DataCoordinate | None 

756 for node_key in self: 

757 if data_id := self[node_key].get("data_id"): 

758 if data_id.hasRecords(): 

759 extractor.update([data_id]) 

760 else: 

761 data_ids_to_expand[data_id.dimensions][data_id].append(node_key) 

762 # Add records we extracted from data IDs that were already expanded, in 

763 # case other nodes want them. 

764 for record_set in extractor.records.values(): 

765 self._dimension_data.setdefault( 

766 record_set.element.name, DimensionRecordSet(record_set.element) 

767 ).update(record_set) 

768 attacher = DimensionDataAttacher(records=self._dimension_data.values(), dimensions=dimensions) 

769 for dimensions, data_ids in data_ids_to_expand.items(): 

770 with butler.query() as query: 

771 # Butler query will be used as-needed to get dimension records 

772 # (from prerequisites) we didn't fetch in advance. These are 

773 # cached in the attacher so we don't look them up multiple 

774 # times. 

775 expanded_data_ids = attacher.attach(dimensions, data_ids.keys(), query=query) 

776 for expanded_data_id, node_keys in zip(expanded_data_ids, data_ids.values()): 

777 for node_key in node_keys: 

778 self.set_data_id(node_key, expanded_data_id) 

779 # Hold on to any records that we had to query for or extracted. 

780 self._dimension_data = attacher.records 

781 

782 def get_dimension_data(self) -> list[DimensionRecordSet]: 

783 """Return the dimension records attached to data IDs.""" 

784 return list(self._dimension_data.values())