#
# LSST Data Management System
#
# Copyright 2008-2016 AURA/LSST.
#
# This product includes software developed by the
# LSST Project (http://www.lsst.org/).
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the LSST License Statement and
# the GNU General Public License along with this program. If not,
# see <https://www.lsstcorp.org/LegalNotices/>.
#
from __future__ import print_function
import unittest
import numpy as np
import lsst.utils.tests
import lsst.afw.detection as afwDet
import lsst.afw.geom as afwGeom
import lsst.afw.image as afwImage
from lsst.meas.deblender.baseline import deblend
import lsst.meas.algorithms as measAlg
def imExt(img):
bbox = img.getBBox()
return [bbox.getMinX(), bbox.getMaxX(), bbox.getMinY(), bbox.getMaxY()]
def doubleGaussianPsf(W, H, fwhm1, fwhm2, a2):
return measAlg.DoubleGaussianPsf(W, H, fwhm1, fwhm2, a2)
def gaussianPsf(W, H, fwhm):
return measAlg.DoubleGaussianPsf(W, H, fwhm)
class DegenerateTemplateTestCase(lsst.utils.tests.TestCase):
def testPeakRemoval(self):
'''
A simple example: three overlapping blobs (detected as 1
footprint with three peaks). Additional peaks are added near
the blob peaks that should be identified as degenerate.
'''
H, W = 100, 100
fpbb = afwGeom.Box2I(afwGeom.Point2I(0, 0), afwGeom.Point2I(W - 1, H - 1))
afwimg = afwImage.MaskedImageF(fpbb)
imgbb = afwimg.getBBox()
img = afwimg.getImage().getArray()
var = afwimg.getVariance().getArray()
var[:, :] = 1.
blob_fwhm = 10.
blob_psf = doubleGaussianPsf(99, 99, blob_fwhm, 2.*blob_fwhm, 0.03)
fakepsf_fwhm = 3.
fakepsf = gaussianPsf(11, 11, fakepsf_fwhm)
blobimgs = []
x = 75.
XY = [(x, 35.), (x, 65.), (50., 50.)]
flux = 1e6
for x, y in XY:
bim = blob_psf.computeImage(afwGeom.Point2D(x, y))
bbb = bim.getBBox()
bbb.clip(imgbb)
bim = bim.Factory(bim, bbb)
bim2 = bim.getArray()
blobimg = np.zeros_like(img)
blobimg[bbb.getMinY():bbb.getMaxY()+1, bbb.getMinX():bbb.getMaxX()+1] += flux*bim2
blobimgs.append(blobimg)
img[bbb.getMinY():bbb.getMaxY()+1,
bbb.getMinX():bbb.getMaxX()+1] += flux * bim2
# Run the detection code to get a ~ realistic footprint
thresh = afwDet.createThreshold(5., 'value', True)
fpSet = afwDet.FootprintSet(afwimg, thresh, 'DETECTED', 1)
fps = fpSet.getFootprints()
self.assertTrue(len(fps) == 1)
# Add new peaks near to the first peaks that will be degenerate
fp0 = fps[0]
for x, y in XY:
fp0.addPeak(x - 10, y + 6, 10)
deb = deblend(fp0, afwimg, fakepsf, fakepsf_fwhm, verbose=True, removeDegenerateTemplates=True)
self.assertTrue(deb.deblendedParents[0].peaks[3].degenerate)
self.assertTrue(deb.deblendedParents[0].peaks[4].degenerate)
self.assertTrue(deb.deblendedParents[0].peaks[5].degenerate)
#-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-
class TestMemory(lsst.utils.tests.MemoryTestCase):
pass
def setup_module(module):
lsst.utils.tests.init()
116 ↛ 117line 116 didn't jump to line 117, because the condition on line 116 was never trueif __name__ == "__main__":
lsst.utils.tests.init()
unittest.main()
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